# BUSCO version is: 3.0.2 # The lineage dataset is: tetrapoda_odb9 (Creation date: 2016-02-13, number of species: 55, number of BUSCOs: 3950) # To reproduce this run: python /lustre/work/johruska/miniconda2/envs/busco.3.0.2/bin/run_busco -i /lustre/scratch/johruska/colaptes/colaptes_reference_genome/reordered_reference_genome/c05_colaptes_arcs3.FINAL.reordered_2.fasta -o busco_output_tetrapoda3.0.2 -l /home/jmanthey/busco/tetrapoda_odb9/ -m genome -c 36 -sp human # # Summarized benchmarking in BUSCO notation for file /lustre/scratch/johruska/colaptes/colaptes_reference_genome/reordered_reference_genome/c05_colaptes_arcs3.FINAL.reordered_2.fasta # BUSCO was run in mode: genome C:91.7%[S:91.0%,D:0.7%],F:3.7%,M:4.6%,n:3950 3623 Complete BUSCOs (C) 3594 Complete and single-copy BUSCOs (S) 29 Complete and duplicated BUSCOs (D) 147 Fragmented BUSCOs (F) 180 Missing BUSCOs (M) 3950 Total BUSCO groups searched