Basic Statistics
Measure | Value |
---|---|
Filename | RJNT_combine_R2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 25044411 |
Filtered Sequences | 0 |
Sequence length | 150 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 135987 | 0.5429834225288828 | No Hit |
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTTTT | 41619750 | 7.3430724 | 9.2665205 | 2 |
AAAAA | 20710375 | 3.4804564 | 4.8929534 | 2 |
CGGCG | 3512840 | 1.6840372 | 5.21279 | 1 |
GGGAG | 3267385 | 1.264485 | 5.035013 | 1 |
GGGGA | 3189955 | 1.2345195 | 5.5319843 | 1 |
GCCAG | 3157560 | 1.2287928 | 5.187014 | 1 |
GCCGG | 2479340 | 1.1885827 | 5.268469 | 1 |