Basic Statistics
Measure | Value |
---|---|
Filename | RJNN_combine_R1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 27370562 |
Filtered Sequences | 0 |
Sequence length | 150 |
%GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 47849 | 0.17481920904656617 | No Hit |
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTTTT | 17487825 | 3.7086053 | 6.598766 | 2 |
AAAAA | 17136345 | 3.1610963 | 4.135213 | 145-146 |
GGGAA | 5438535 | 1.4624307 | 5.01826 | 1 |
GCGGG | 2614695 | 0.8946976 | 5.1955214 | 1 |