Basic Statistics
Measure | Value |
---|---|
Filename | LTT_combine_R2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 23977101 |
Filtered Sequences | 0 |
Sequence length | 150 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 90929 | 0.3792326687033599 | No Hit |
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTTTT | 26866905 | 5.508365 | 7.7387033 | 2 |
AAAAA | 14229570 | 2.7209544 | 5.0224237 | 2 |
GGGAA | 5615355 | 1.7756946 | 5.6014695 | 1 |
GGAAA | 6462625 | 1.7281423 | 5.2299085 | 1 |
GGGAG | 3548810 | 1.3270715 | 5.1396136 | 1 |
GGGGA | 3505875 | 1.311016 | 5.23029 | 1 |
CGGGG | 2577925 | 1.1447266 | 6.0661263 | 1 |
GCGGG | 1836825 | 0.81564146 | 5.069159 | 1 |