Basic Statistics
Measure | Value |
---|---|
Filename | RXNT_combine_R2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24394478 |
Filtered Sequences | 0 |
Sequence length | 150 |
%GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 146408 | 0.6001686119293064 | No Hit |
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTTTT | 43657935 | 9.788586 | 11.755042 | 2 |
AAAAA | 21052150 | 4.771949 | 6.4881263 | 2 |
CGGCG | 4683875 | 1.7377746 | 5.446342 | 1 |
GCGGC | 4144580 | 1.5376896 | 5.146071 | 1 |
GCCGG | 3235515 | 1.2004155 | 5.266667 | 1 |
GCGGG | 2723980 | 1.0091466 | 5.592053 | 1 |