Basic Statistics
Measure | Value |
---|---|
Filename | RXNT_combine_R1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24394478 |
Filtered Sequences | 0 |
Sequence length | 150 |
%GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 80497 | 0.3299804160597329 | No Hit |
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTTTT | 26918050 | 6.4031186 | 9.587099 | 2 |
AAAAA | 23843695 | 5.1062593 | 7.2143483 | 145-146 |
CGGCG | 4596175 | 1.7123778 | 5.1255083 | 1 |
GCGGC | 4050600 | 1.5091153 | 5.1976876 | 1 |
GCCGG | 3149095 | 1.1732452 | 5.044034 | 1 |
GCGGG | 2556170 | 0.96067727 | 5.4403763 | 1 |