Supplemental Material for Yankovitz et al., 2021

Figure S1: Benchmarking using synthetic data, using the known cell-type composition as input.

Figure S2: The cell lineage is informative for eQTL studies.

Figure S3: Benchmarking using synthetic data: switch-off data.

Figure S4: The ability to identify the direction of alteration in effect size.

Figure S5: Quality assessment.

Table S1: CeL-Gen’s inferred cell-type-specificity of eQTLs in influenza-infected mice.

Table S2: Westra’s inferred cell-type-specificity of eQTLs in influenza-infected mice.

Table S3: Running time.

Table S4: Westra’s inferred cell-type-specificity of eQTLs in influenza-infected mice.