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Supplemental Material for Yankovitz et al., 2021

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posted on 2021-01-26, 17:29 authored by Gal Yankovitz, Ofir Cohn, Eran Bacharach, Naama Peshes-Yaloz, Yael Steuerman, Fuad A. Iraqi, Irit Gat-Viks

Figure S1: Benchmarking using synthetic data, using the known cell-type composition as input.

Figure S2: The cell lineage is informative for eQTL studies.

Figure S3: Benchmarking using synthetic data: switch-off data.

Figure S4: The ability to identify the direction of alteration in effect size.

Figure S5: Quality assessment.

Table S1: CeL-Gen’s inferred cell-type-specificity of eQTLs in influenza-infected mice.

Table S2: Westra’s inferred cell-type-specificity of eQTLs in influenza-infected mice.

Table S3: Running time.

Table S4: Westra’s inferred cell-type-specificity of eQTLs in influenza-infected mice.

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Article title

Leveraging the cell lineage to predict cell type specificity of regulatory variation from bulk genomics

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