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Supplemental Material for Bracewell et al., 2020
figure
posted on 2020-01-22, 14:07 authored by Ryan BracewellRyan Bracewell, Anita Tran, kamalakar Chatla, Doris BachtrogFigure S1 shows an Integrative Genomics Viewer image of a region
on Muller A of the genome assembly with mapped Hi-C reads filtered for Pilon polishing. Figure S2 contains a plot of Illumina and Nanopore sequencing coverage over the
draft genome assembly. Figure S3 shows the Hi-C heatmap and scaffolding as in
Figure 1 with nucleotide diversity (π) estimated from the isofemale line in
50kb non-overlapping windows across the assembly. Figure S4 displays the
genomic distribution of the ten most frequently encountered transposable
elements (TEs) for each Muller element in the genome assembly. Figure S5 shows
the genomic location of D. subobscura pericentromeric orthologs from
Muller C and D on the fused Muller CD of D. bifasciata.