GSA Journals
Browse
1/1
5 files

Supplemental Material for Bracewell et al., 2020

figure
posted on 2020-01-22, 14:07 authored by Ryan BracewellRyan Bracewell, Anita Tran, kamalakar Chatla, Doris Bachtrog
Figure S1 shows an Integrative Genomics Viewer image of a region on Muller A of the genome assembly with mapped Hi-C reads filtered for Pilon polishing. Figure S2 contains a plot of Illumina and Nanopore sequencing coverage over the draft genome assembly. Figure S3 shows the Hi-C heatmap and scaffolding as in Figure 1 with nucleotide diversity (π) estimated from the isofemale line in 50kb non-overlapping windows across the assembly. Figure S4 displays the genomic distribution of the ten most frequently encountered transposable elements (TEs) for each Muller element in the genome assembly. Figure S5 shows the genomic location of D. subobscura pericentromeric orthologs from Muller C and D on the fused Muller CD of D. bifasciata.

History

Article title

Chromosome-Level Assembly of Drosophila bifasciata Reveals Important Karyotypic Transition of the X Chromosome

Manuscript #

G3/2019/400922

Article DOI

10.1534/g3.119.400922

Usage metrics

    G3: Genes|Genomes|Genetics

    Categories

    Licence

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC