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Supplemental Material for Amarillas et al., 2021

posted on 2021-01-12, 17:23 authored by Luis Amarillas, Claudia Villicaña, Luis Lightbourn-Rojas, Arturo González-Robles, Josefina León-Félix
Supplementary figures S1 and S2; supplementary tables S1 and S2.
Figure S1. Cumulative GC skew analysis of phiC120 genome. The cumulative GC-skew and the GC-skew were represented by red and blue lines, respectively. The maximum and minimum of GC-skew predicted the origin of replication at 44,827 nt and the terminus at 165,541 nt.
Figure S2. Comparative genomic map of phiC120 with similar phages belonging to genus Mosigvirus using CGView. Similar regions of phiC120 shared with phages RB69, phiE142 and Escherichia coli O157 typing phage 3 (O157tp3) are shown in red, green and blue, respectively. GC content is depicted in black; positive and negative GC skew are shown in green and purple.

Table S1. Features of the open reading frames (ORFs) of bacteriophage phiC120 and homology to proteins databases.

Table S2. In silico analysis of phage phiC120 proteins with allergenic potential with sliding 80mer FASTA hits (FAO/WHO >35%).


Article title

The complete genome and comparative analysis of the phage phiC120 infecting multidrug resistant Escherichia coli and Salmonella strains

Manuscript #