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Supplementary Material for Sams and Boyko, 2018

dataset
posted on 14.11.2018 by Aaron J. Sams, Adam R. Boyko
supplemental_file_list.pdf-- contains a list of all supplemental files.

supplemental_materials.pdf-- contains supplemental figures, tables, and references.

at_risk_id_key.tsv-- contains phenotype information for at-risk dogs in this study.

breed_id_key.tsv-- contains breed and sex information for breed dogs in this study.

at_risk.ped.gz contains genotype data (gzipped) in PLINK .ped format for at-risk dogs in this study.

at_risk.map contains marker location information in PLINK .map format for at-risk dogs in this study.

breeds.ped.gz contains genotype data (gzipped) in PLINK .ped format for dogs in the breed analysis in this study.

breeds.map contains marker location information in PLINK .map format for dogs in the breed analysis in this study.
postprocess_germline.py contains a python (v2) script for postprocessing germline homozygosity tracts generated using the flags presented in Materials & Methods.

History

Article title

Fine-Scale Resolution of Runs of Homozygosity Reveal Patterns of Inbreeding and Substantial Overlap with Recessive

Manuscript #

G3/2018/200836

Article DOI

10.1534/g3.118.200836

Licence

Exports