Supplemental material for Ovenden et al., 2018
datasetposted on 2018-04-16, 14:26 authored by Ben Ovenden, Andrew Milgate, Len J. Wade, Greg J. Rebetzke, James B. Holland
The supplementary files contain the data used in the study "Accounting for genotype-by-environment interactions and residual genetic variation in genomic selection for water-soluble carbohydrate concentration in wheat" by Ben Ovenden, Andrew Milgate, Len J. Wade, Greg J. Rebetzke and James B. Holland.
File S1 contains the SNP genotype information, File S2 contains the relationship matrix and File S3 contains a PCA plot of the first two eigenvectors of the relationship matrix. File S4 contains the phenotype dataset for WSCC. File S5 is script for the models used for genomic selection and cross-validation and File S6 contains the cross-validation sets.
Article titleAccounting for Genotype-by-Environment Interactions and Residual Genetic Variation in Genomic Selection for Water-Soluble Carbohydrate Concentration in Wheat
Read the peer-reviewed publication
Water soluble carbohydratesNon-structural carbohydratesWheat improvementPlant breedingAbiotic stressDrought toleranceGenomic selectionResidual genetic variationGenotype-by-environment interactionFactor analytic modelRelative accuracyCrop and Pasture Biomass and BioproductsCrop and Pasture Biochemistry and PhysiologyCrop and Pasture Improvement (Selection and Breeding)Quantitative Genetics (incl. Disease and Trait Mapping Genetics)