SUPPLEMENTAL FILES .zip (189.23 kB)

Supplemental Material for Talebi et al., 2020

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posted on 19.10.2020, 16:01 by Reza Talebi, Tomasz Szmatoła, Gábor Mészáros, Saber Qanbari
File S1 contains ROH segments per individuals. NSEG: number of ROH segment, KB: length of ROH per individuals, KBAVG: mean length of ROH per individuals, FROH: genomic inbreeding coefficient estimated from ROH.

Table S1 shows summary of the number of ROH, mean ROH length per individual, and percent of coverage per autosome by chromosome in five populations of chickens.

File S2 contains ROH islands identified in five chicken populations. Chromosome number, start and end position (bp) of ROH islands on chromosome, number of SNPs in corresponding region, size of ROH island, and details of gene information overlapped in ROH islands.

File S3 shows the list of genes located within ROH islands and detected in multiple populations.

History

Article title

Runs of Homozygosity in Modern Chicken Revealed by Sequence Data

Manuscript #

G3/2020/401860

Article DOI

10.1534/g3.120.401860

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