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Supplemental Material for Sun et al., 2021

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posted on 01.03.2021, 22:10 by Kathie Sun, Daniel Oreper, Sarah Schoenrock, Rachel McMullan, Paola Giusti-Rodriguez, Vasyl Zhabotynsky, Darla Miller, Lisa Tarantino, Fernando Pardo-Manuel de Villena, William Valdar
Supplemental figures, tables, and data associated with manuscript.

Full description of files provided explained in FileS1.

Data files include full demographic data for SP1 and SP2; curated lists of 25-mers used to detect reference and variant alleles in RNA-seq data from the X chromosome; posterior distributions for covariates estimated in all Bayesian hierarchical models; k-mer counts of the curated 25-mers for both populations; k-mer counts of 45-mers from DNA-seq using CC and CC founder strains; positions of segmental duplications and inversions in the Xce.

History

Article title

Bayesian modeling of skewed X inactivation in genetically diverse mice identifies a novel Xce allele associated with copy number changes

Manuscript #

GENETICS/2020/303701

Article DOI

10.1534/genetics.120.303701