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Supplemental Material for Skelly et al., 2019

dataset
posted on 21.05.2019 by Daniel A. Skelly, Narayanan Raghupathy, Raymond F. Robledo, Joel H Graber, Elissa J. Chesler
This fileset includes the Supplementary Datasets for the manuscript "Reference Trait Analysis reveals correlations between gene expression and quantitative traits in disjoint samples". A description of each dataset follows:

Supplementary Dataset 1: Normalized hippocampal gene expression matrix. RNA-Seq data were processed as described (Methods). To obtain normalized gene expression matrix, raw counts in each sample were normalized to the upper quartile value and transformed to normal scores.
Supplementary Dataset 2: Traits derived from open-field arena exploration assay and used in case study of Reference Trait Analysis. Supplementary Table 1 provides basic information on phenotypes, while complete details of animal rearing, husbandry and phenotyping are presented in Logan et al. (2013).
Supplementary Dataset 3: Traits derived from light-dark box behavior assay and used in case study of Reference Trait Analysis. Supplementary Table 1 provides basic information on phenotypes, while complete details of animal rearing, husbandry and phenotyping are presented in Logan et al. (2013).
Supplemental Table and Figures are also included.

History

Article title

Reference Trait Analysis Reveals Correlations Between Gene Expression and Quantitative Traits in Disjoint Samples

Manuscript #

GENETICS/2018/301865R1

Article DOI

10.1534/genetics.118.301865

Licence

Exports