Supplemental Material for Silke, Wei, and Xia, 2018

dataset

posted on 2018-10-24, 19:04 authored by Jordan Silke, Yulong WeiYulong Wei, Xuhua XiaXuhua Xia

Counts of RNA-seq reads mapped for 11 bacterial species. Site 1 corresponds with the terminal C in the canonical CCUCC aSD motif with 31 representing the 30th base downstream of CCUCC.

Supplementary file S1 contains RNA-seq BLAST hits.

Supplementary file S2 contains the list of genes used to determine putative SD sequences in all species studied.

History

Article title

RNA-Seq-Based Analysis Reveals Heterogeneity in Mature 16S rRNA 3’ Termini and Extended Anti-Shine-Dalgarno Motifs in Bacterial Species

Manuscript #

G3/2018/200729

Article DOI

10.1534/g3.118.200729

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RNA-Seq-Based Analysis Reveals Heterogeneity in Mature 16S rRNA 3’ Termini and Extended Anti-Shine-Dalgarno Motifs in Bacterial Species

G3: Genes|Genomes|Genetics

Keywords

RNA-seq mapping Bioinformatics

Licence

CC BY 4.0