TEXT
TEXT
TEXT
TEXT
TEXT
TEXT
TEXT
TEXT
TEXT
DOCUMENT
1/1
Supplemental Material for Schoonmaker et al., 2019
dataset
posted on 2019-11-06, 20:09 authored by Ashley Schoonmaker, Yue Hao, David McK. Bird, Gavin ConantGavin ConantFigure S1 gives the distribution of Ka values for the three MIG genomes
Ten core data files are broken down as:
1-3: Gene order files:
· Meloidogyne_arenaria_POInT_geneorders.txt
· Meloidogyne_incognita_POInT_geneorders.txt
· Meloidogyne_javanica_POInT_geneorders.txt
4: The inferred ancestral gene order: Nematode_WGT_OptOrder.txt
5-8: 4 models of gene loss after triplication:
· WGT_Null_model.txt
· WGT_1Frac_model.txt
· WGT_1FracS_model.txt
· WGT_1FracS2_model.txt
9: The optimized phylogenetic topology, Nematode_WGT_OptTopo.tre
and
10: The set of orthology predictions from POInT:
ThreeSpp_WGT_1Frac_SingF_DSep_Top2_m2Opt2_postprobs.txt.