posted on 2024-11-12, 19:19authored byMarcos Francisco Perez
Tables S3 & S5 for Perez 2024. CelEsT and maxCelEsT networks with annotations. These table (sheet 2 imported into R or Python) can be used directly with the decoupleR/decoupler package ('source' refers to TF and 'target' refers to the interaction target) . Additional annotations are present - whether the interaction was detected or not in each dataset (NA means that the TF was not present in that dataset), and the WormBase Gene IDs / gene names for all TFs and targets.
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Article title
CelEst: a unified gene regulatory network for estimating transcription factor activities in C. elegans