.BAM

CB3740_eDp20_WS235_sort.bam (2.47 GB)

TEXT

CB3740_eDp20_WS235_sort_depth.txt (1.31 GB)

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eDp20_chrI_13mil.txt (27.93 MB)

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N2_chrI_13mil.txt (27.68 MB)

.BAM

SEA296_MY1_130E_chrI_merge_RG.bam (512.46 MB)

TEXT

SEA296_MY1_130E_merge.g.vcf (3.24 MB)

.BAM

SEA300_duprm_RG.bam (128.58 MB)

TEXT

SEA300_duprm_RG.g.vcf (1.39 MB)

.BAM

SEA302_S2_WS230_duprmRG.bam (1.51 GB)

TEXT

SEA302_S2_WS230_duprmRG.g.vcf (1.47 MB)

.BAM

SEA305_S5_WS230_duprmRG.bam (1.31 GB)

TEXT

SEA305_S5_WS230_duprmRG.g.vcf (1.4 MB)

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12 files

Supplemental Material for Morton et al., 2023

dataset

posted on 2023-03-07, 16:33 authored by Elizabeth A. Morton, Ashley N. Hall, Josh T. Cuperus, Christine Queitsch

Whole genome sequencing was performed on C. elegans strains with different rDNA copy numbers.

CB3740_eDp20_WS235_sort.bam – Aligned whole genome sequence data for C. elegans strain CB3740 (eDf24 I; eDp20 (I,II); mnT12 (IV,X))

CB3740_eDP20_WS235_sort_depth.txt – Read depth analysis file for whole genome sequencing of C. elegans strain CB3740 (eDf24 I; eDp20 (I,II); mnT12 (IV,X))

eDP20_chrI_13mil.txt – Read depth data for right arm of ChrI of C. elegans strain CB3740

N2_chrI_13mil.txt – Read depth data for right arm of ChrI of C. elegans wild type strain N2

SEA296_MY1_130E_chrI_merge_RG.bam – Aligned whole genome sequence data for C. elegans strain SEA296 (mIs13[myo-2p::GFP + pes-10p::GFP + F22B7.9p::GFP] I, catIR8[I:, N2>MY1]). Homozygous for 64-copy rDNA array.

SEA296_MY1_130E_merge.g.vcf – VCF for sequence variants in C. elegans strain SEA296 (mIs13[myo-2p::GFP + pes-10p::GFP + F22B7.9p::GFP] I, catIR8[I:, N2>MY1]). Homozygous for 64-copy rDNA array.

SEA300_duprm_RG.bam – Aligned whole genome sequence data for C. elegans strain SEA300 (catIR12[I:?-end , MY1>N2]). Homozygous for 417-copy rDNA array.

SEA300_duprm_RG.g.vcf – VCF for sequence variants in C. elegans strain SEA300 (catIR12[I:?-end , MY1>N2]). Homozygous for 417-copy rDNA array.

SEA302_S2_WS230_duprumRG.bam – Aligned whole genome sequence data for C. elegans strain SEA302 (catIR14[I:~13500000-end, JU775>N2]). Homozygous for 81-copy rDNA array.

SEA302_S2_WS230_duprmRG.g.vcf – VCF for sequence variants in C. elegans strain SEA302 (catIR14[I:~13500000-end, JU775>N2]). Homozygous for 81-copy rDNA array.

SEA305_S5_WS230_duprmRG.bam – Aligned whole genome sequence data for C. elegans strain SEA305 (catIR17[I:~3600000-end, MY16>N2]) Homozygous for 73-copy rDNA array.

SEA305_S5_WS230_duprmRG.g.vcf – VCF for sequence variants in C. elegans strain SEA305 (catIR17[I:~3600000-end, MY16>N2]) Homozygous for 73-copy rDNA array.