Supplemental Material for Miller et al., 2019
datasetposted on 2019-07-09, 17:17 authored by Jeffrey Miller, Noah Reid, Diane Nacci, Andrew Whitehead
Figure S1. Maximization of collinearity in the final consensus map from male and female informative markers.
Figure S2. Linkage map assignment heat map of recombination fractions and LOD scores for scaffolds with sufficient markers for mapping.
Figure S3. LGs that differed between the two sex-specific maps and the order and orientation of the consensus map (ALLMAPs) scaffolds in closely related platyfish and medaka.
Figure S4. Platyfish and medaka dot-plots for each killifish LG.
Figure S5. Zebrafish ortholog dot-plots.
Figure S6. Dot plots for each human (right, 1-23) and spotted gar (left, 1-29) chromosome.
Figure S7. Circos plots of fusions and duplicated chromosomes.
File S1. - BARCODES
File S2. - CUSTOM PERL SCRIPTS
File S3. - CUSTOM R SCRIPTS
File S4. - ADDRESS FOR GFFs ALL TAXA
File S5. - MICROSAT MAP TABLE
File S6. – CIRCOS HOMOLOGY