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Figure S1 - Liu, Neuenkirchen et al.pdf (60.03 kB)
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Figure S2 - Liu, Neuenkirchen et al.pdf (59.94 kB)
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Figure S3 - Liu, Neuenkirchen et al.pdf (61.99 kB)
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Figure S4 - Liu, Neuenkirchen et al.pdf (85.11 kB)
DATASET
Reagents Table - Liu, Neuenkirchen et al.xlsx (18.11 kB)
DATASET
Table S1 - Liu, Neuenkirchen et al.xlsx (10.45 kB)
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Table S2 - Liu, Neuenkirchen et al.xlsx (10.9 kB)
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Table S3 - Liu, Neuenkirchen et al.xlsx (11.09 kB)
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Table S4 - Liu, Neuenkirchen et al.xlsx (15.24 MB)
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Supplemental Material for Liu et al., 2020
dataset
posted on 2020-12-16, 19:16 authored by Na Liu, Nils Neuenkirchen, Mei Zhong, Haifan LinTable S1 provides an overview of the DamID sequencing reads and mapping
rates. Table S2 contains details about the distribution of GATC sites in the
female Drosophila genome. Table S3 summarizes the DNA oligomers used for
cloning, DamID-seq, and PCR screening of transgenic flies. Table S4 lists all
methylated GATC sites and their sequencing reads in Dam-only, Dam-Piwi(WT), and
Dam-Piwi(YK) transgenic flies. The genomic coordinates were converted to the Drosophila
melanogaster genome version dm6 from dm3 by UCSC LiftOver. Figure S1 shows
the annotation of uniquely mapped reads in euchromatin and heterochromatin.
Figure S2 shows the annotation of multi-mapped reads in euchromatin and
heterochromatin. Figure S3 illustrates the number of modified GATC sites in
repeat and non-repeat sequences. Figure S4 depicts methylation peaks normalized
to the GATC density in genes and repeats. Reagents Table contains an overview
of fly strains, plasmids, reagents, and software packages used in this work.
