DOCUMENT
Figure_S1.pdf (152.64 kB)
DOCUMENT
Figure_S2.pdf (149.26 kB)
DOCUMENT
Figure_S3.pdf (151.65 kB)
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File_S1_code_simulation.R (35.89 kB)
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File_S2_Sample_genomic_data.txt (986.61 kB)
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File_S3_Sample_map_data.txt (17.98 kB)
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Table_S1.xlsx (17.89 kB)
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Supplemental Material for Jiang, Schmidt, and Reif, 2018.
dataset
posted on 2018-03-15, 20:47 authored by Yong Jiang, Renate H Schmidt, Jochen C. ReifFigure S1 shows the prediction accuracies of
GBLUP, EGBLUP, LEGBLUP and HGBLUP for simulated traits with heritability 0.5
and σ2a/σ2aa = 4:3.
Figure S2 shows the prediction accuracies of the four models for simulated traits with heritability 0.7 and σ2a/σ2aa = 3:1.
Table S1 provides the prediction accuracies of the four models for the 26 agronomic traits in the rice data set.
File S1 contains the R code used to generate the data for the simulation study.
File S2 and S3 contain sample genomic and physical map data sets for running the code.
Figure S2 shows the prediction accuracies of the four models for simulated traits with heritability 0.7 and σ2a/σ2aa = 3:1.
Table S1 provides the prediction accuracies of the four models for the 26 agronomic traits in the rice data set.
File S1 contains the R code used to generate the data for the simulation study.
File S2 and S3 contain sample genomic and physical map data sets for running the code.
History
Article title
Haplotype-Based Genome-Wide Prediction Models Exploit Local Epistatic Interactions Among MarkersManuscript #
G3/2017/300548-TR1Article DOI
10.1534/g3.117.300548Usage metrics
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