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Supplemental Material for Jiang, Schmidt, and Reif, 2018.

dataset
posted on 15.03.2018 by Yong Jiang, Renate H Schmidt, Jochen C. Reif
Figure S1 shows the prediction accuracies of GBLUP, EGBLUP, LEGBLUP and HGBLUP for simulated traits with heritability 0.5 and σ2a2aa = 4:3.

Figure S2 shows the prediction accuracies of the four models for simulated traits with heritability 0.7 and σ2a2aa = 3:1.

Table S1 provides the prediction accuracies of the four models for the 26 agronomic traits in the rice data set.

File S1 contains the R code used to generate the data for the simulation study.

File S2 and S3 contain sample genomic and physical map data sets for running the code.

History

Article title

Haplotype-Based Genome-Wide Prediction Models Exploit Local Epistatic Interactions Among Markers

Manuscript #

G3/2017/300548-TR1

Article DOI

10.1534/g3.117.300548

Licence

Exports