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SupFig1_kmer.pdf (1.02 MB)
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SupFig2_ANTP_tree_v2.pdf (631.96 kB)
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SupFig3_PRD_tree_v2.pdf (778.19 kB)
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SupTable1_SequencingStatistics.docx (14.61 kB)
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SupTable2_Repeat.xlsx (10.23 kB)
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SupTable3_Pfamdomain_revised.xlsx (261.88 kB)
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SupTable4_Orthogroup_v2.xlsx (56.89 kB)
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SupTable5_Hv_homeoID_v2.xlsx (11.18 kB)
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Supplemental Material for Hamada, Satoh, and Khalturin, 2020

dataset
posted on 2020-09-08, 15:54 authored by Mayuko Hamada, Noriyuki Satoh, Konstantin Khalturin
Supplementary information: k-mer frequency distribution plots in the Hydra viridissima A99 genome is found in Figure S1. Phylogenetic analysis of ANTP genes is in Figure S2. Phylogenetic analysis of PRD genes is presented in Figure S3. Sequencing statistics for Hydra viridissima A99 are in Table S1. A summary of repetitive sequences in the Hydra viridissima A99 genome assembly are found in Table S2. Pfam domain-containing genes in the Hydra viridissima A99 genome are available in Table S3. Orthologs enriched in Hydra viridissima A99 (A) and Hydra (B) are in Table S4. Gene IDs of ANTP genes in Hydra viridissima A99 are in Table S5.

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Article title

A Reference Genome from the Symbiotic Hydrozoan, Hydra viridissima

Manuscript #

G3/2020/401411R1

Article DOI

10.1534/g3.120.401411

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    G3: Genes|Genomes|Genetics

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