Supplemental Material for Halpern et al., 2020
datasetposted on 20.07.2020 by Hannah C. Halpern, Peng Qi, Robert C. Kemerait
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
Table S1. Summary of Fusarium oxysporum f. sp. vasinfectum isolates analyzed, and the number of isolates that possessed identical combinations of EF genotypes and DAPC group assignments.
Figure S1. Genotype accumulation curve constructed from the de novo-based SNP dataset in poppr (version 2.0), showing the number of unique multilocus genotypes (MLGs) identified in the population of FOV, and the minimum number of SNPs needed to distinguish each MLG.
Figure S2. Maximum likelihood (ML) trees constructed from the de novo-based SNP dataset in MEGA7 showing the phylogenetic relationships among Fusarium oxysporum isolates.
Figure S3. Population genetic structure as determined from the de novo-based SNP dataset.
Figure S4. Nine genetically distinct groups of FOV identified through K-means hierarchical clustering using the de novo-based dataset.