Supplemental Material for Du et al., 2020.pdf (643.61 kB)

Supplemental Material for Du et al., 2020

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posted on 27.03.2020 by Yuheng Du, Qianhui Huang, Cedric Arisdakessian, Lana Garmire
Supplemental material for Evaluation of STAR and Kallisto on single cell RNA-Seq data alignment. Include: comparison on dropout rates, comparison with FISH gini, comparison with Bowtie2, proportion of cell types, clustering result for Kallisto with only cDNA as index, alignment rate comparison, cell types comparison, and marker genes comparison

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Article title

Evaluation of STAR and Kallisto on Single Cell RNA-Seq Data Alignment

Manuscript #

G3/2020/401160

Article DOI

10.1534/g3.120.401160

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