G3_Additional-files_Supplementary-figures_Supplementary_Tables.zip (6.22 MB)
Supplemental Material for Demirci et al., 2020
dataset
posted on 2020-12-01, 15:31 authored by Sevgin Demirci, Roven Rommel Fuentes, Willem van Dooijeweert, Saulo Aflitos, Elio Schijlen, Thamara Hesselink, Dick de Ridder, Aalt D.J. van Dijk, Sander PetersFigure S1
contains allele frequency counts for duplications, inversions and deletions.
Figure S2 contains clustering of the duplications and melon accessions based on
presence/absence of duplications. Figures S3-S5 contain maximum likelihood
trees based on duplications, inversions and deletions, respectively. Figure S6
contains a maximum likelihood tree with bootstrap values based on combined SV
events. Table S1 contains the details of accessions used in this study
including country of origin, accession number, common name and groups and
subspecies they belong to. Table S2 contains the presence/absence variation
(PAV) of 104 genes in linkage group V in 100 melon accessions. Table S3
contains the overrepresented GO terms in genes overlapping with SV.