1/1
0/0

Supplemental Material for Cottin et al., 2020

dataset
posted on 20.12.2019 by Aurélien COTTIN, Benjamin PENAUD, Jean-Christophe Glaszmann, Nabila Yahiaoui, Mathieu Gautier
File S1 contains SNP counts for all simulations.
File S2 contains the accuracy values of LAI software with varying number of generations, differentiation and source-representative sample size (DiffGenSam simulation).
File S3 contains the accuracy values of LAI software with varying sample size of the third source-representatives. Figure S1 displays the accuracy values of LAI software with varying levels of differentiation, number of generations and source-representative sample size (DiffGenSam simulation). Figure S2 displays the accuracy values of LAI software with varying sample size of the third source-representatives (SamBal simulation).
Figure S3 displays the memory usage of LAI software with varying levels of differentiation, number of generations and source-representative sample size (DiffGenSam simulation).
Figure S4 displays the computation time of LAI software with varying levels of differentiation, number of generations and source-representative sample size (DiffGenSam simulation).
Figure S5 displays the estimated time since admixture of SABER with varying levels of differentiation, number of generations and source-representative sample size (DiffGenSam simulation)

History

Article title

Simulation-Based Evaluation of Three Methods for Local Ancestry Deconvolution of Non-modelcrop Species Genomes

Manuscript #

G3/2019/400873

Article DOI

10.1534/g3.119.400873

Licence

Exports