Supplemental Material for Campbell et al., 2019
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
A table of rainbow trout ohnologs originating from the Ss4R as described is provided as Supplemental File S1. Supplemental File S2 contains summary alignment statistics from the HTSeq analysis. Supplemental File S3 contains information on gene expression from edgeR, including log2fold difference in expression, raw, and FDR corrected p –values. Supplemental File S4 shows the specific genes associated with enriched GO terms in tetrasomic regions of the rainbow trout genome. Supplemental File S5 shows differentially expressed genes between cross type with associated GO terms. Supplemental File S6 shows proportions of disomic and tetrasomic ohnologs with protein-protein interaction information. All RNA-seq data used in this manuscript have been uploaded to NCBI (BioProject Number PRJNA269115) and the rainbow trout genome can be accessed at https://www.ncbi.nlm.nih.gov/assembly/GCF_002163495.1/.