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Supplemental Material for Bush et al., 2018

dataset
posted on 07.12.2018, 18:25 by Stephen J. Bush, Mary E. B. McCulloch, Charity Muriuki, Mazdak Salavati, Gemma M. Davis, Iseabail L. Farquhar, Zofia M. Lisowski, Alan L. Archibald, David A. Hume, Emily Clark

Figure S1 contains Principal Component Analysis of sheep GI tract samples. Table S1 contains averaged TPM expression estimates for sheep GI tract tissues. Table S2 contains a list of genes within each cluster from the gene-to-gene network graph. Table S3 contains GO term enrichment for each cluster from the gene-to-gene network graph for sheep. Table S4 contains individual sheep GI tract TPM expression estimates. Table S5 contains differentially expressed genes in the sheep rumen between three developmental stages. Table S6 contains differentially expressed genes in the sheep ileum between three developmental stages. Table S7 contains differentially expressed genes in the sheep abomasum between three developmental stages. Table S8 contains GO term enrichment of differentially expressed genes in rumen, ileum and abomasum between three developmental stages. Table S9 contains individual TPM expression estimates for GI tract samples from one-week old goats. Table S10 contains differentially expressed genes in rumen samples from age-matched sheep and goats. Table S11 contains differentially expressed genes in ileum samples from age-matched sheep and goats. Table S12 contains differentially expressed genes in large colon samples from age-matched sheep and goats.


History

Article title

Comprehensive Transcriptional Profiling of the Gastrointestinal Tract of Ruminants from Birth to Adulthood Reveals Strong Developmental Stage Specific Gene Expression

Manuscript #

G3/2018/200561

Article DOI

10.1534/g3.118.200810

Licence

Exports