Supplemental Material for Alioto et al., 2019

Figure S2: Fragment size distributions of sequencing libraries

Figure S3: Fosmid pool assembly pipeline flowchart

Figure S4: Phylogeny of interferon (IFN) protein family.

Figure S5: Phylogeny of Toll-like receptor (TLR) protein family

Table S1: DNA concentration data

Table S2: Animals used to provide tissue samples.

Table S3: Mapping rates for liver infection time-course RNA-seq

Table S4: EVM weights

Table S5: list of woodchuck genes and their orthologs in mouse and human