10.25386/genetics.8792594.v1
Rohan Mehta
Rohan
Mehta
Alison F. Feder
Alison
F. Feder
Simina M. Boca
Simina
M. Boca
Noah A. Rosenberg
Noah
A. Rosenberg
Supplemental Material for Mehta et al., 2019
GSA Journals
2019
FST
Haplotypes
Linkage disequilibrium
Population structure
SNPs
2019-07-08 15:17:23
Dataset
https://gsajournals.figshare.com/articles/dataset/Supplemental_Material_for_Mehta_et_al_2019/8792594
Figure S1 provides comparisons of observed FST to theoretical and null values of FST+, for both random SNP sets and SNP windows. Figure S2 displays the distribution of r^2 values from linear regressions for observed values of FST against theoretical or null values, for random SNP sets and for SNP windows. Figure S3 plots rescaled error as a function of the number of SNPs in the haplotype, for four quartiles of the sequence distance between the n-1st SNP and the nth SNP, n=2, 5, 10, 30. Figure S4 shows FST as a function of the number of SNPs in windows of neighboring SNPs, for pairs of geographic regions.