Jacobson, Elsie C. Jain, Lekha Vickers, Mark H. Olins, Ada L. Olins, Donald E. Perry, Jo K. O’Sullivan, Justin M. Supplemental Material for Jacobsen et al., 2019 <p><b>Additional file 1. Supplementary tables 1-22. </b>1.<b> </b>Significantly differentially expressed genes in promyelocytes treated with TNF-a, differentiated into granulocytes and macrophages, and granulocytes treated with TNF-a. 2. RT-qPCR and RNA-seq of <i>CDK1</i>, <i>TNF</i>, and <i>VCAM1</i>. 3-21. Functional analysis summary tables of GSEA, GO, KEGG, and hallmark terms enriched in subsets of differentially expressed genes. 22. Primers and probes used for RT-qPCR validation.</p><p><br> </p><p><b>Supplementary figure 1. </b>PCA of VST-normalized transcript counts show conditions cluster together in A) promyelocytes treated with TNF-a, B) granulocytes treated with TNF-a, and C) promyelocytes differentiated into granulocytes and macrophages.</p> <p><i> </i></p> cytokine;cell cycle;gene regulation;leukemia;differentiation;Genomics;Cancer;Innate Immunity;Gene Expression (incl. Microarray and other genome-wide approaches) 2019-07-01
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10.25387/g3.8146097.v1