10.25386/genetics.6205691.v1 Herman K. Edskes Herman K. Edskes Maryam Mukhamedova Maryam Mukhamedova Bouke K. Edskes Bouke K. Edskes Reed B. Wickner Reed B. Wickner Supplemental Material for Edskes et al., 2018 GSA Journals 2018 LUG1/YLR352W F-box protein Ure2p nitrogen catabolite repression Hap4p prion URE3 gln1 Genetics 2018-05-16 16:24:15 Dataset https://gsajournals.figshare.com/articles/dataset/Supplemental_Material_for_Edskes_et_al_2018/6205691 Supplemental Methods_figures_tables.pdf - Provides a detailed description of the culture conditions, induction of <i>Hermes</i> transposition, selection of colonies carrying a transposition, extraction of cellular DNA, PCR amplification and isolation of the junction points between transposon and chromosomal insertion site, next-generation sequencing of these sites, and analysis of the data by visual display and by counting insertions per open reading frame. <br><br> Exon Intron Counts.xlsx - Gives the insertions in every yeast open reading frame, distinguishing exons from introns where appropriate.<br><br>Sorted Hits.xlsx - Gives prominent hits sorted by functional group, “TY gag-pol Counts.xlsx comparing insertions in the Ty retrotransposons at different locations in the genome. <br><br>Count Insertions in ORFs and Introns.txt - The Python program used for counting insertions. <br><br>LUGsIGV-InsertDistributions.pptx - Is a slide show of insert distributions in each of 500 genes for which insertions were recovered more frequently in [ure-o] than in [URE3] cultures.