Schoonmaker, Ashley Hao, Yue Bird, David McK. Conant, Gavin Supplemental Material for Schoonmaker et al., 2019 <div>Figure S1 gives the distribution of Ka values for the three MIG genomes</div><div>Ten core data files are broken down as:</div><div>1-3: Gene order files:</div><div>· Meloidogyne_arenaria_POInT_geneorders.txt </div><div>· Meloidogyne_incognita_POInT_geneorders.txt</div><div>· Meloidogyne_javanica_POInT_geneorders.txt</div><div>4: The inferred ancestral gene order: Nematode_WGT_OptOrder.txt</div><div>5-8: 4 models of gene loss after triplication:</div><div>· WGT_Null_model.txt</div><div>· WGT_1Frac_model.txt</div><div>· WGT_1FracS_model.txt</div><div>· WGT_1FracS2_model.txt</div><div>9: The optimized phylogenetic topology, Nematode_WGT_OptTopo.tre</div><div> and </div><div>10: The set of orthology predictions from POInT: </div><div> ThreeSpp_WGT_1Frac_SingF_DSep_Top2_m2Opt2_postprobs.txt.</div> polyploidy;root-knot nematode;evolutionary modeling;Bioinformatics;Evolutionary Biology;Genomics 2019-11-06
    https://gsajournals.figshare.com/articles/dataset/Supplemental_Material_for_Schoonmaker_et_al_2019/10248929
10.25387/g3.10248929.v1